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Uncultivated Ruminococcaceae bacterium UBA4998 genome recovered from SRX691278

Identifiers
BioSample: SAMN06455633; Sample name: Ruminococcaceae bacterium UBA4998; SRA: SRS2035895
Organism
Ruminococcaceae bacterium UBA4998
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; unclassified Oscillospiraceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Luzhou
isolateUBA4998
isolation sourcemud
metagenome sourcefermentation metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX691278 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated44.34%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage13.05
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1562003.
Description

Uncultivated genome recovered from an assembly of the SRX691278 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455633
ID:
6455633

BioProject SRA Nucleotide

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