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Uncultivated Ruminococcaceae bacterium UBA5579 genome recovered from SRX147848

Identifiers
BioSample: SAMN06455631; Sample name: Ruminococcaceae bacterium UBA5579; SRA: SRS2032349
Organism
Ruminococcaceae bacterium UBA5579
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae; unclassified Oscillospiraceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA5579
isolation sourceguineaPig8
metagenome sourceCavia porcellus metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX147848 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated81.65%
contamination_estimated1.68%
environmental_sampletrue
genome_coverage10.95
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the Cavia porcellus metagenome reads: SRR496703.
Description

Uncultivated genome recovered from an assembly of the SRX147848 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455631
ID:
6455631

BioProject SRA Nucleotide

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