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Uncultivated Comamonadaceae bacterium UBA3515 genome recovered from SRX822832

Identifiers
BioSample: SAMN06455539; Sample name: Comamonadaceae bacterium UBA3515; SRA: SRS2039240
Organism
Comamonadaceae bacterium UBA3515
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; unclassified Comamonadaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA3515
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822832 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated85.62%
contamination_estimated1.36%
environmental_sampletrue
genome_coverage7.52
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749449.
Description

Uncultivated genome recovered from an assembly of the SRX822832 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455539
ID:
6455539

BioProject SRA Nucleotide

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