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Uncultivated Idiomarina sp. UBA1919 genome recovered from ERX552353

Identifiers
BioSample: SAMN06455532; Sample name: Idiomarina sp. UBA1919; SRA: SRS2031070
Organism
Idiomarina sp. UBA1919
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina; unclassified Idiomarina
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA1919
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX552353 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated91.94%
contamination_estimated0.43%
environmental_sampletrue
genome_coverage14.27
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR594410.
Description

Uncultivated genome recovered from an assembly of the ERX552353 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455532
ID:
6455532

BioProject SRA Nucleotide

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