U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Lactobacillus acetotolerans UBA4970 genome recovered from SRX691279

Identifiers
BioSample: SAMN06455402; Sample name: Lactobacillus acetotolerans UBA4970; SRA: SRS2035900
Organism
Lactobacillus acetotolerans
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Luzhou
isolateUBA4970
isolation sourcemud
metagenome sourcefermentation metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX691279 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated91.76%
contamination_estimated2.23%
environmental_sampletrue
genome_coverage105.37
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1562004.
Description

Uncultivated genome recovered from an assembly of the SRX691279 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455402
ID:
6455402

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center