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Uncultivated Dehalococcoides mccartyi UBA5554 genome recovered from SRX392470

Identifiers
BioSample: SAMN06455393; Sample name: Dehalococcoides mccartyi UBA5554; SRA: SRS2033778
Organism
Dehalococcoides mccartyi
cellular organisms; Bacteria; Bacillati; Chloroflexota; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA5554
isolation sourcebioreactor
metagenome sourcebioreactor metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX392470 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated99.01%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage43.02
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the bioreactor metagenome reads: SRR1050527.
Description

Uncultivated genome recovered from an assembly of the SRX392470 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455393
ID:
6455393

BioProject SRA Nucleotide

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