U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Betaproteobacteria bacterium UBA5216 genome recovered from SRX866631

Identifiers
BioSample: SAMN06455352; Sample name: Betaproteobacteria bacterium UBA5216; SRA: SRS2035508
Organism
Betaproteobacteria bacterium UBA5216
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; unclassified Betaproteobacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationBrazil: Amazon River
isolateUBA5216
isolation sourcewater
metagenome sourceaquatic metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX866631 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated96.33%
contamination_estimated0.67%
environmental_sampletrue
genome_coverage24.93
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the aquatic metagenome reads: SRR1790678.
Description

Uncultivated genome recovered from an assembly of the SRX866631 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455352
ID:
6455352

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center