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Uncultivated Alcanivorax sp. UBA2114 genome recovered from ERX556114

Identifiers
BioSample: SAMN06455334; Sample name: Alcanivorax sp. UBA2114; SRA: SRS2031561
Organism
Alcanivorax sp. UBA2114
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax; unclassified Alcanivorax
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA2114
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX556114 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated87.61%
contamination_estimated1.30%
environmental_sampletrue
genome_coverage14.79
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR598980.
Description

Uncultivated genome recovered from an assembly of the ERX556114 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455334
ID:
6455334

BioProject SRA Nucleotide

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