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Uncultivated Brevundimonas naejangsanensis UBA3245 genome recovered from SRX822772

Identifiers
BioSample: SAMN06455302; Sample name: Brevundimonas naejangsanensis UBA3245; SRA: SRS2039214
Organism
Brevundimonas naejangsanensis
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas
Package
Microbe; version 1.0
Attributes
metagenome sourceterrestrial metagenome
isolateUBA3245
isolation sourceNew York City MTA subway
geographic locationUSA:New York City
subsource noteGenome binned from sequencing reads available in SRX822772 metagenome
sample typemetagenomic assembly
collection datenot applicable
assembly_method_version4.4.1
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749389.
assembly_methodCLC de novo assembler
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
contamination_estimated0.01%
metagenomicTRUE
completeness_estimated92.38%
mapping_methodBWA (BWA-MEM)
genome_coverage31.39
mapping_method_version0.7.12-r1039
environmental_sampleTRUE
Description

Uncultivated genome recovered from an assembly of the SRX822772 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455302
ID:
6455302

BioProject SRA Nucleotide

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