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Uncultivated Pseudomonas stutzeri UBA2301 genome recovered from SRX823116

Identifiers
BioSample: SAMN06455166; Sample name: Pseudomonas stutzeri UBA2301; SRA: SRS2034604
Organism
Stutzerimonas stutzeri
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Stutzerimonas; Stutzerimonas stutzeri group; Stutzerimonas stutzeri subgroup
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA2301
isolation sourcemetal/plastic
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX823116 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated99.59%
contamination_estimated1.09%
environmental_sampletrue
genome_coverage141.68
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749733.
Description

Uncultivated genome recovered from an assembly of the SRX823116 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455166
ID:
6455166

BioProject SRA Nucleotide

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