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Uncultivated Flavobacteriales bacterium UBA5538 genome recovered from SRX472115

Identifiers
BioSample: SAMN06455136; Sample name: Flavobacteriales bacterium UBA5538; SRA: SRS2033913
Organism
Flavobacteriales bacterium UBA5538
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; unclassified Flavobacteriales
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationHong Kong
isolateUBA5538
isolation sourcewater
metagenome sourcewastewater metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX472115 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated88.33%
contamination_estimated1.23%
environmental_sampletrue
genome_coverage17.86
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the wastewater metagenome reads: SRR1171178.
Description

Uncultivated genome recovered from an assembly of the SRX472115 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455136
ID:
6455136

BioProject SRA Nucleotide

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