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Uncultivated Rhodobacterales bacterium UBA3077 genome recovered from SRX559946

Identifiers
BioSample: SAMN06455130; Sample name: Rhodobacterales bacterium UBA3077; SRA: SRS2034329
Organism
Rhodobacterales bacterium UBA3077
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; unclassified Rhodobacterales
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Coal Oil Point, Santa Barbara, California
isolateUBA3077
isolation sourceOil polluted marine water
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX559946 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated71.95%
contamination_estimated3.24%
environmental_sampletrue
genome_coverage52.6
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1313318.
Description

Uncultivated genome recovered from an assembly of the SRX559946 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455130
ID:
6455130

BioProject SRA Nucleotide

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