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Uncultivated Micavibrio sp. UBA6964 genome recovered from ERX552288

Identifiers
BioSample: SAMN06455096; Sample name: Micavibrio sp. UBA6964; SRA: SRS2030848
Organism
Micavibrio sp. UBA6964
cellular organisms; Bacteria; Pseudomonadati; Bdellovibrionota; Bdellovibrionia; Bdellovibrionales; Pseudobdellovibrionaceae; Micavibrio; unclassified Micavibrio
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA6964
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX552288 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated91.82%
contamination_estimated1.23%
environmental_sampletrue
genome_coverage19.54
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR594288.
Description

Uncultivated genome recovered from an assembly of the ERX552288 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455096
ID:
6455096

BioProject SRA Nucleotide

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