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Uncultivated Hydrogenovibrio sp. UBA653 genome recovered from SRX748862

Identifiers
BioSample: SAMN06455005; Sample name: Hydrogenovibrio sp. UBA653; SRA: SRS2036269
Organism
Hydrogenovibrio sp. UBA653
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio; unclassified Hydrogenovibrio
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationAtlantic Ocean:Lost City Hydrothermal Field
isolateUBA653
isolation sourceLost City biofilm
metagenome sourceaquatic metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX748862 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated81.95%
contamination_estimated0.03%
environmental_sampletrue
genome_coverage24.18
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the aquatic metagenome reads: SRR1636508.
Description

Uncultivated genome recovered from an assembly of the SRX748862 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455005
ID:
6455005

BioProject SRA Nucleotide

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