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Uncultivated Lactobacillus acetotolerans UBA5511 genome recovered from SRX691285

Identifiers
BioSample: SAMN06454905; Sample name: Lactobacillus acetotolerans UBA5511; SRA: SRS2036065
Organism
Lactobacillus acetotolerans
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Mianyang
isolateUBA5511
isolation sourcemud
metagenome sourcefermentation metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX691285 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated94.14%
contamination_estimated0.87%
environmental_sampletrue
genome_coverage24.79
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1562010.
Description

Uncultivated genome recovered from an assembly of the SRX691285 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454905
ID:
6454905

BioProject SRA Nucleotide

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