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Uncultivated Lachnoclostridium sp. UBA3051 genome recovered from SRX034809

Identifiers
BioSample: SAMN06454892; Sample name: Lachnoclostridium sp. UBA3051; SRA: SRS2031865
Organism
Lachnoclostridium sp. UBA3051
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium; unclassified Lachnoclostridium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA3051
isolation sourceSwitch grass fiber attached community in cow rumen, 72 hour post incubation
metagenome sourcebovine gut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX034809 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated94.10%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage34.38
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the bovine gut metagenome reads: SRR094166,SRR094417,SRR094403,SRR094415,SRR094418,SRR094416,SRR094405.
Description

Uncultivated genome recovered from an assembly of the SRX034809 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454892
ID:
6454892

BioProject SRA Nucleotide

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