U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Clostridium sp. UBA4606 genome recovered from SRX822222

Identifiers
BioSample: SAMN06454885; Sample name: Clostridium sp. UBA4606; SRA: SRS2038629
Organism
Clostridium sp. UBA4606
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium; unclassified Clostridium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA4606
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822222 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated90.78%
contamination_estimated0.86%
environmental_sampletrue
genome_coverage6.78
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1748839.
Description

Uncultivated genome recovered from an assembly of the SRX822222 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454885
ID:
6454885

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center