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Uncultivated Megasphaera sp. UBA5897 genome recovered from SRX834619

Identifiers
BioSample: SAMN06454721; Sample name: Megasphaera sp. UBA5897; SRA: SRS2034957
Organism
Megasphaera sp. UBA5897
cellular organisms; Bacteria; Bacillati; Bacillota; Negativicutes; Veillonellales; Veillonellaceae; Megasphaera; unclassified Megasphaera
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationKenya
isolateUBA5897
isolation sourcefeces
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX834619 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated96.25%
contamination_estimated1.80%
environmental_sampletrue
genome_coverage25.25
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747018.
Description

Uncultivated genome recovered from an assembly of the SRX834619 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454721
ID:
6454721

BioProject SRA Nucleotide

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