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Uncultivated Rhodobacteraceae bacterium UBA3443 genome recovered from ERX943719

Identifiers
BioSample: SAMN06454520; Sample name: Rhodobacteraceae bacterium UBA3443; SRA: SRS2031851
Organism
Rhodobacteraceae bacterium UBA3443
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; unclassified Paracoccaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA3443
isolation sourceColumbia River coastal margin, salinty 33
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX943719 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated89.56%
contamination_estimated1.44%
environmental_sampletrue
genome_coverage32.63
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR864075.
Description

Uncultivated genome recovered from an assembly of the ERX943719 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454520
ID:
6454520

BioProject SRA Nucleotide

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