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Uncultivated Methylobacter sp. UBA6701 genome recovered from SRX644735

Identifiers
BioSample: SAMN06454508; Sample name: Methylobacter sp. UBA6701; SRA: SRS2034386
Organism
Methylobacter sp. UBA6701
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter; unclassified Methylobacter
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Lake Washington
isolateUBA6701
isolation sourcesediment
metagenome sourcefreshwater sediment metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX644735 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated87.05%
contamination_estimated1.47%
environmental_sampletrue
genome_coverage32.39
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the freshwater sediment metagenome reads: SRR1505171.
Description

Uncultivated genome recovered from an assembly of the SRX644735 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454508
ID:
6454508

BioProject SRA Nucleotide

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