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Uncultivated Halieaceae bacterium UBA4438 genome recovered from SRX802077

Identifiers
BioSample: SAMN06454400; Sample name: Halieaceae bacterium UBA4438; SRA: SRS2036348
Organism
Halieaceae bacterium UBA4438
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Cellvibrionales; Halieaceae; unclassified Halieaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNorth Sea
isolateUBA4438
isolation sourceSubsurface seawater
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX802077 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated92.92%
contamination_estimated0.46%
environmental_sampletrue
genome_coverage46.73
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1699487.
Description

Uncultivated genome recovered from an assembly of the SRX802077 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454400
ID:
6454400

BioProject SRA Nucleotide

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