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Uncultivated Alphaproteobacteria bacterium UBA5343 genome recovered from SRX696244

Identifiers
BioSample: SAMN06454385; Sample name: Alphaproteobacteria bacterium UBA5343; SRA: SRS2036099
Organism
Alphaproteobacteria bacterium UBA5343
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; unclassified Alphaproteobacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Municipal Pensacola Beach, FL
isolateUBA5343
isolation sourcebeach sand
metagenome sourcebeach sand metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX696244 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated65.72%
contamination_estimated0.59%
environmental_sampletrue
genome_coverage4.61
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the beach sand metagenome reads: SRR1569871.
Description

Uncultivated genome recovered from an assembly of the SRX696244 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454385
ID:
6454385

BioProject SRA Nucleotide

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