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Uncultivated Rhodanobacter sp. UBA5168 genome recovered from SRX710578

Identifiers
BioSample: SAMN06454356; Sample name: Rhodanobacter sp. UBA5168; SRA: SRS2036160
Organism
Rhodanobacter sp. UBA5168
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Rhodanobacteraceae; Rhodanobacter; unclassified Rhodanobacter
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Axel Heiberg Island,Nunavut
isolateUBA5168
isolation sourcesoil
metagenome sourcesoil metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX710578 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated85.68%
contamination_estimated1.52%
environmental_sampletrue
genome_coverage32.3
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the soil metagenome reads: SRR1586274.
Description

Uncultivated genome recovered from an assembly of the SRX710578 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454356
ID:
6454356

BioProject SRA Nucleotide

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