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Uncultivated Leptolinea sp. UBA5366 genome recovered from SRX691283

Identifiers
BioSample: SAMN06454108; Sample name: Leptolinea sp. UBA5366; SRA: SRS2036029
Organism
Leptolinea sp. UBA5366
cellular organisms; Bacteria; Bacillati; Chloroflexota; Anaerolineae; Anaerolineales; Anaerolineaceae; Leptolinea; unclassified Leptolinea
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Chengdu
isolateUBA5366
isolation sourcemud
metagenome sourcefermentation metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX691283 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated82.07%
contamination_estimated2.73%
environmental_sampletrue
genome_coverage12.71
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1562008.
Description

Uncultivated genome recovered from an assembly of the SRX691283 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454108
ID:
6454108

BioProject SRA Nucleotide

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