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Uncultivated Chitinophagaceae bacterium UBA4407 genome recovered from SRX468783

Identifiers
BioSample: SAMN06454090; Sample name: Chitinophagaceae bacterium UBA4407; SRA: SRS2033902
Organism
Chitinophagaceae bacterium UBA4407
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Chitinophagia; Chitinophagales; Chitinophagaceae; unclassified Chitinophagaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Columbus, MS
isolateUBA4407
isolation sourcewater
metagenome sourceactivated sludge metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX468783 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated98.52%
contamination_estimated0.25%
environmental_sampletrue
genome_coverage47.09
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the activated sludge metagenome reads: SRR1168574.
Description

Uncultivated genome recovered from an assembly of the SRX468783 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454090
ID:
6454090

BioProject SRA Nucleotide

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