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Uncultivated Rhodobacteraceae bacterium UBA3438 genome recovered from ERX943717

Identifiers
BioSample: SAMN06454020; Sample name: Rhodobacteraceae bacterium UBA3438; SRA: SRS2031847
Organism
Rhodobacteraceae bacterium UBA3438
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; unclassified Paracoccaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA3438
isolation sourceColumbia River plume, salinty 25
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX943717 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated96.25%
contamination_estimated0.83%
environmental_sampletrue
genome_coverage32.02
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR864073.
Description

Uncultivated genome recovered from an assembly of the ERX943717 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06454020
ID:
6454020

BioProject SRA Nucleotide

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