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Uncultivated Pseudomonas stutzeri UBA3240 genome recovered from SRX822774

Identifiers
BioSample: SAMN06453995; Sample name: Pseudomonas stutzeri UBA3240; SRA: SRS2039216
Organism
Stutzerimonas stutzeri
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Stutzerimonas; Stutzerimonas stutzeri group; Stutzerimonas stutzeri subgroup
Package
Microbe; version 1.0
Attributes
metagenome sourceterrestrial metagenome
isolateUBA3240
isolation sourceNew York City MTA subway
geographic locationUSA:New York City
subsource noteGenome binned from sequencing reads available in SRX822774 metagenome
sample typemetagenomic assembly
collection datenot applicable
assembly_method_version4.4.1
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749391.
assembly_methodCLC de novo assembler
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
contamination_estimated0.14%
metagenomicTRUE
completeness_estimated96.71%
mapping_methodBWA (BWA-MEM)
genome_coverage266.58
mapping_method_version0.7.12-r1039
environmental_sampleTRUE
Description

Uncultivated genome recovered from an assembly of the SRX822774 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453995
ID:
6453995

BioProject SRA Nucleotide

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