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Uncultivated Stenotrophomonas maltophilia UBA6302 genome recovered from SRX823425

Identifiers
BioSample: SAMN06453922; Sample name: Stenotrophomonas maltophilia UBA6302; SRA: SRS2034915
Organism
Stenotrophomonas maltophilia
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas maltophilia group
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA6302
isolation sourcewood
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX823425 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated92.16%
contamination_estimated0.80%
environmental_sampletrue
genome_coverage94.92
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1750042.
Description

Uncultivated genome recovered from an assembly of the SRX823425 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453922
ID:
6453922

BioProject SRA Nucleotide

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