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Uncultivated Clostridium sulfidigenes UBA5307 genome recovered from SRX823316

Identifiers
BioSample: SAMN06453851; Sample name: Clostridium sulfidigenes UBA5307; SRA: SRS2034817
Organism
Clostridium sulfidigenes
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA5307
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX823316 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated98.48%
contamination_estimated2.02%
environmental_sampletrue
genome_coverage9.13
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749933.
Description

Uncultivated genome recovered from an assembly of the SRX823316 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453851
ID:
6453851

BioProject SRA Nucleotide

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