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Uncultivated Klebsiella pneumoniae UBA5665 genome recovered from SRX822301

Identifiers
BioSample: SAMN06453736; Sample name: Klebsiella pneumoniae UBA5665; SRA: SRS2038730
Organism
Klebsiella pneumoniae
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA5665
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822301 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated94.64%
contamination_estimated0.53%
environmental_sampletrue
genome_coverage60.29
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1748918.
Description

Uncultivated genome recovered from an assembly of the SRX822301 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453736
ID:
6453736

BioProject SRA Nucleotide

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