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Uncultivated Candidatus Microthrix sp. UBA1323 genome recovered from ERX552239

Identifiers
BioSample: SAMN06453711; Sample name: Candidatus Microthrix sp. UBA1323; SRA: SRS2030619
Organism
Candidatus Microthrix sp. UBA1323
cellular organisms; Bacteria; Bacillati; Actinomycetota; Acidimicrobiia; Acidimicrobiales; Microthrixaceae; Candidatus Microthrix; unclassified Candidatus Microthrix
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA1323
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX552239 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated83.53%
contamination_estimated6.22%
environmental_sampletrue
genome_coverage35.63
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR594343.
Description

Uncultivated genome recovered from an assembly of the ERX552239 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453711
ID:
6453711

BioProject SRA Nucleotide

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