U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Cellvibrionales bacterium UBA5860 genome recovered from SRX696248

Identifiers
BioSample: SAMN06453427; Sample name: Cellvibrionales bacterium UBA5860; SRA: SRS2036109
Organism
Cellvibrionales bacterium UBA5860
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Cellvibrionales; unclassified Cellvibrionales
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Municipal Pensacola Beach, FL
isolateUBA5860
isolation sourcebeach sand
metagenome sourcebeach sand metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX696248 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated91.91%
contamination_estimated3.15%
environmental_sampletrue
genome_coverage8.69
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the beach sand metagenome reads: SRR1570769.
Description

Uncultivated genome recovered from an assembly of the SRX696248 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453427
ID:
6453427

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center