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Uncultivated Epsilonproteobacteria bacterium UBA1344 genome recovered from SRX144200

Identifiers
BioSample: SAMN06453409; Sample name: Epsilonproteobacteria bacterium UBA1344; SRA: SRS2032294
Organism
Epsilonproteobacteria bacterium UBA1344
cellular organisms; Bacteria; Pseudomonadati; Campylobacterota; unclassified Campylobacterota
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA1344
isolation sourcebioreactor
metagenome sourcebioreactor metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX144200 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated94.72%
contamination_estimated0.54%
environmental_sampletrue
genome_coverage79.39
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the bioreactor metagenome reads: SRR490746.
Description

Uncultivated genome recovered from an assembly of the SRX144200 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453409
ID:
6453409

BioProject SRA Nucleotide

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