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Uncultivated Syntrophaceae bacterium UBA2208 genome recovered from SRX327722

Identifiers
BioSample: SAMN06453248; Sample name: Syntrophaceae bacterium UBA2208; SRA: SRS2033441
Organism
Syntrophaceae bacterium UBA2208
cellular organisms; Bacteria; Pseudomonadati; Thermodesulfobacteriota; Syntrophia; Syntrophales; Syntrophaceae; unclassified Syntrophaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Suncor tailings pond 6
isolateUBA2208
isolation sourcesuncor tailing pond 6 meters
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX327722 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated87.94%
contamination_estimated3.23%
environmental_sampletrue
genome_coverage28.45
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR943330,SRR943329,SRR942941,SRR943334,SRR943332,SRR943333,SRR943331.
Description

Uncultivated genome recovered from an assembly of the SRX327722 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453248
ID:
6453248

BioProject SRA Nucleotide

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