U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Mariprofundus sp. UBA3091 genome recovered from SRX685735

Identifiers
BioSample: SAMN06453113; Sample name: Mariprofundus sp. UBA3091; SRA: SRS2035587
Organism
Mariprofundus sp. UBA3091
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Zetaproteobacteria; Mariprofundales; Mariprofundaceae; Mariprofundus; unclassified Mariprofundus
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: near Green River, Utah
isolateUBA3091
isolation sourcewater
metagenome sourcegroundwater metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX685735 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated99.58%
contamination_estimated0.84%
environmental_sampletrue
genome_coverage16.64
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the groundwater metagenome reads: SRR1556897.
Description

Uncultivated genome recovered from an assembly of the SRX685735 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453113
ID:
6453113

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center