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Uncultivated Rhizobiales bacterium UBA5190 genome recovered from SRX390521

Identifiers
BioSample: SAMN06453045; Sample name: Rhizobiales bacterium UBA5190; SRA: SRS2033734
Organism
Candidatus Raskinella chloraquaticus
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Phreatobacteraceae; Candidatus Raskinella
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA5190
isolation sourcedrinking water
metagenome sourcefreshwater metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX390521 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated95.04%
contamination_estimated0.32%
environmental_sampletrue
genome_coverage574.44
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the freshwater metagenome reads: SRR1047955.
Description

Uncultivated genome recovered from an assembly of the SRX390521 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453045
ID:
6453045

BioProject SRA Nucleotide

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