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Uncultivated Alistipes sp. UBA1825 genome recovered from SRX252167

Identifiers
BioSample: SAMN06452967; Sample name: Alistipes sp. UBA1825; SRA: SRS2032684
Organism
Alistipes sp. UBA1825
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; unclassified Alistipes
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUnited Kingdom: England
isolateUBA1825
isolation sourceCecal contents
metagenome sourcechicken gut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX252167 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated88.97%
contamination_estimated3.69%
environmental_sampletrue
genome_coverage13.12
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the chicken gut metagenome reads: SRR789046.
Description

Uncultivated genome recovered from an assembly of the SRX252167 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452967
ID:
6452967

BioProject SRA Nucleotide

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