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Uncultivated Alphaproteobacteria bacterium UBA6372 genome recovered from SRX834624

Identifiers
BioSample: SAMN06452864; Sample name: Alphaproteobacteria bacterium UBA6372; SRA: SRS2035054
Organism
Alphaproteobacteria bacterium UBA6372
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; unclassified Alphaproteobacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationKenya
isolateUBA6372
isolation sourcefeces
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX834624 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated81.87%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage9.48
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747023.
Description

Uncultivated genome recovered from an assembly of the SRX834624 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452864
ID:
6452864

BioProject SRA Nucleotide

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