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Uncultivated Porticoccaceae bacterium UBA3445 genome recovered from ERX943719

Identifiers
BioSample: SAMN06452667; Sample name: Porticoccaceae bacterium UBA3445; SRA: SRS2031853
Organism
Porticoccaceae bacterium UBA3445
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Cellvibrionales; Porticoccaceae; unclassified Porticoccaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA3445
isolation sourceColumbia River coastal margin, salinty 33
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX943719 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated72.41%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage22.06
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR864075.
Description

Uncultivated genome recovered from an assembly of the ERX943719 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452667
ID:
6452667

BioProject SRA Nucleotide

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