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Uncultivated Leclercia adecarboxylata UBA3131 genome recovered from SRX822173

Identifiers
BioSample: SAMN06452412; Sample name: Leclercia adecarboxylata UBA3131; SRA: SRS2038561
Organism
Leclercia adecarboxylata
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Leclercia
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA3131
isolation sourcewood
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822173 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated92.93%
contamination_estimated3.66%
environmental_sampletrue
genome_coverage15.13
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1748790.
Description

Uncultivated genome recovered from an assembly of the SRX822173 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452412
ID:
6452412

BioProject SRA Nucleotide

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