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Uncultivated Gammaproteobacteria bacterium UBA2539 genome recovered from SRX1050745

Identifiers
BioSample: SAMN06452277; Sample name: Gammaproteobacteria bacterium UBA2539; SRA: SRS2032050
Organism
Gammaproteobacteria bacterium UBA2539
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; unclassified Gammaproteobacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationBaltic Sea
isolateUBA2539
isolation sourcewater
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX1050745 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated75.66%
contamination_estimated0.31%
environmental_sampletrue
genome_coverage25.39
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR2053277.
Description

Uncultivated genome recovered from an assembly of the SRX1050745 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452277
ID:
6452277

BioProject SRA Nucleotide

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