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Uncultivated Bacillus amyloliquefaciens UBA5705 genome recovered from SRX467340

Identifiers
BioSample: SAMN06452236; Sample name: Bacillus amyloliquefaciens UBA5705; SRA: SRS2033901
Organism
Bacillus amyloliquefaciens
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus amyloliquefaciens group
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Tianjin
isolateUBA5705
isolation sourcesoil
metagenome sourcesoil metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX467340 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated99.69%
contamination_estimated0.12%
environmental_sampletrue
genome_coverage183.68
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the soil metagenome reads: SRR1168414,SRR1168459,SRR1164896.
Description

Uncultivated genome recovered from an assembly of the SRX467340 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452236
ID:
6452236

BioProject SRA Nucleotide

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