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Uncultivated Alphaproteobacteria bacterium UBA4642 genome recovered from SRX834662

Identifiers
BioSample: SAMN06452109; Sample name: Alphaproteobacteria bacterium UBA4642; SRA: SRS2035360
Organism
Alphaproteobacteria bacterium UBA4642
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; unclassified Alphaproteobacteria
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationKenya
isolateUBA4642
isolation sourcefeces
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX834662 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated80.22%
contamination_estimated0.79%
environmental_sampletrue
genome_coverage17.69
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747061.
Description

Uncultivated genome recovered from an assembly of the SRX834662 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452109
ID:
6452109

BioProject SRA Nucleotide

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