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Uncultivated Halieaceae bacterium UBA5721 genome recovered from ERX556299

Identifiers
BioSample: SAMN06452022; Sample name: Halieaceae bacterium UBA5721; SRA: SRS2031612
Organism
Halieaceae bacterium UBA5721
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Cellvibrionales; Halieaceae; unclassified Halieaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA5721
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX556299 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated99.26%
contamination_estimated1.20%
environmental_sampletrue
genome_coverage59.92
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599354.
Description

Uncultivated genome recovered from an assembly of the ERX556299 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452022
ID:
6452022

BioProject SRA Nucleotide

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