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Uncultivated Pusillimonas sp. UBA3600 genome recovered from ERX556325

Identifiers
BioSample: SAMN06452012; Sample name: Pusillimonas sp. UBA3600; SRA: SRS2031710
Organism
Pusillimonas sp. UBA3600
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas; unclassified Pusillimonas
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA3600
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX556325 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated93.04%
contamination_estimated0.47%
environmental_sampletrue
genome_coverage12.6
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: ERR599382.
Description

Uncultivated genome recovered from an assembly of the ERX556325 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452012
ID:
6452012

BioProject SRA Nucleotide

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