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Uncultivated Geobacter sp. UBA1606 genome recovered from SRX806382

Identifiers
BioSample: SAMN06451979; Sample name: Geobacter sp. UBA1606; SRA: SRS2038453
Organism
Geobacter sp. UBA1606
cellular organisms; Bacteria; Pseudomonadati; Thermodesulfobacteriota; Desulfuromonadia; Geobacterales; Geobacteraceae; Geobacter; unclassified Geobacter
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationSingapore
isolateUBA1606
isolation sourcesediments
metagenome sourcesediment metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX806382 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated70.82%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage17.78
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the sediment metagenome reads: SRR1706145.
Description

Uncultivated genome recovered from an assembly of the SRX806382 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451979
ID:
6451979

BioProject SRA Nucleotide

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