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Uncultivated Gallionellaceae bacterium UBA1605 genome recovered from SRX806380

Identifiers
BioSample: SAMN06451978; Sample name: Gallionellaceae bacterium UBA1605; SRA: SRS2038450
Organism
Gallionellaceae bacterium UBA1605
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Nitrosomonadales; Gallionellaceae; unclassified Gallionellaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationSingapore
isolateUBA1605
isolation sourcesediments
metagenome sourcesediment metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX806380 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated66.89%
contamination_estimated1.63%
environmental_sampletrue
genome_coverage126.26
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the sediment metagenome reads: SRR1706143.
Description

Uncultivated genome recovered from an assembly of the SRX806380 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451978
ID:
6451978

BioProject SRA Nucleotide

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