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Uncultivated Chryseobacterium indologenes UBA4404 genome recovered from SRX822750

Identifiers
BioSample: SAMN06451895; Sample name: Chryseobacterium indologenes UBA4404; SRA: SRS2039180
Organism
Chryseobacterium indologenes
cellular organisms; Bacteria; Pseudomonadati; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae; Chryseobacterium group; Chryseobacterium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA4404
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822750 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated93.86%
contamination_estimated3.02%
environmental_sampletrue
genome_coverage10.25
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749367.
Description

Uncultivated genome recovered from an assembly of the SRX822750 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451895
ID:
6451895

BioProject SRA Nucleotide

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