U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Peptococcaceae bacterium UBA5356 genome recovered from SRX691283

Identifiers
BioSample: SAMN06451884; Sample name: Peptococcaceae bacterium UBA5356; SRA: SRS2036017
Organism
Peptococcaceae bacterium UBA5356
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Peptococcaceae; unclassified Peptococcaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Chengdu
isolateUBA5356
isolation sourcemud
metagenome sourcefermentation metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX691283 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated92.88%
contamination_estimated0.29%
environmental_sampletrue
genome_coverage36.13
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1562008.
Description

Uncultivated genome recovered from an assembly of the SRX691283 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451884
ID:
6451884

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center