U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Staphylococcus saprophyticus UBA2710 genome recovered from SRX822769

Identifiers
BioSample: SAMN06451796; Sample name: Staphylococcus saprophyticus UBA2710; SRA: SRS2039208
Organism
Staphylococcus saprophyticus
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus
Package
Microbe; version 1.0
Attributes
metagenome sourceterrestrial metagenome
isolateUBA2710
isolation sourceNew York City MTA subway
geographic locationUSA:New York City
subsource noteGenome binned from sequencing reads available in SRX822769 metagenome
sample typemetagenomic assembly
collection datenot applicable
assembly_method_version4.4.1
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749386.
assembly_methodCLC de novo assembler
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
contamination_estimated0.00%
metagenomicTRUE
completeness_estimated98.69%
mapping_methodBWA (BWA-MEM)
genome_coverage8.86
mapping_method_version0.7.12-r1039
environmental_sampleTRUE
Description

Uncultivated genome recovered from an assembly of the SRX822769 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451796
ID:
6451796

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center